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Getting poster data...
Rachel Bellone, Pierre Lê-Bury,Christophe Becavin , Catherine Dauga, Olivier Dussurget, Javier Pizarro-Cerda, Pierre Lechat (Institut Pasteur, 28 rue du Docteur Roux 75015 Paris)
SynTView is a published interactive multi-view genome browser for next-generation comparative microorganism genomics. SynTViewJS is the rewrite of the software in javascript with the addition of new features. The software is characterised by the presentation of syntenic organisations of microbial genomes and the visualisation of polymorphism data obtained from next generation sequencing. SynTViewJS is built as a generic genome browser including sub-maps that hold information about genomic objects. After selecting genomes of interest, the users can explore them visually by genomic location, or directly go to specific genes by name. Several genomic maps can be stacked ordered by a phylogenetic tree according to biological metadata on top of each other. The creation of a SynTView website is very helpful in the analysis of a large number of strains, bringing together phylogeny, polymorphisms, larger variants such as indels, coverage, as well as functional annotations and strains meta-data. SynTView has been also integrated to the Yersiniomics web site, a platform for visualizing and analysing every heterogeneous Yersinia "omics" dataset published.