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Maik Röder, David González and Roderic Guigó (Centre for Genomic Regulation (CRG) and UPF, Dr. Aiguader 88, 08003 Barcelona, Spain)
High throughput sequencing technologies generate vast amounts of data that require subsequent management, analysis and visualization. The Grape RNAseq Analysis Pipeline Environment implements a set of workflows that allow for easy exploration of RNAseq data. Among other features, it enables the users to perform quality checks, read mapping and generation of expression and splicing statistics. The results are stored in a MySQL database and become immediately available through a REST-ful back end server that is connected to a web application using the Google chart tools for display. Charts are rendered using HTML5/SVG technology to provide cross-browser compatibility (including VML for older IE versions) and cross platform portability to iPhones, iPads and Android. No plugins are needed.