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Jakub Wojciechowski, Alicja Nowakowska (Wroclaw, wyb. Wyspianskiego 27, Wroclaw University of Science and Technology)
High throughput studies generate vast amounts of network data which poses a visualisation challenge. 3D network visualisation tools are not common, deal with multiple rendering problems and require users to learn a new software. To overcome this problem, we used VMD to visualise amyloid interactome data in three dimensions. VMD, and other protein structure visualisation tools, are designed to deal with large input files and provide multiple options with regards to the display. Hence, they seem a perfect solution for visualisation of complex networks by the molecular biology community.